a. Preliminary assumptions
To lay the groundwork for a comprehensive understanding of the adsorption process within the framework of statistical physics, the following fundamental assumptions are introduced. These assumptions while simplifying the complexity of the system, provide a valuable foundation for theoretical analysis and interpretation. They offer a simplified yet informative perspective on the intricate interactions between adsorbate molecules and the adsorbent's cavities [38, 39].
- Ideal gas behavior: MB entities are assumed to behave as an ideal gas neglecting intermolecular interactions. This simplification allows for easier theoretical treatment of the system.
- Internal degrees of freedom: Each MB entity possesses multiple internal degrees of freedom, including electronic, translational, rotational and vibrational modes.
- Negligibility of vibrational modes: The high energy barrier associated with most internal vibrational modes of MB atoms makes these modes negligible at the relevant temperature range allowing us to exclude them from the analysis.
- Focus on translational motion: The translational degree of freedom is considered the most significant contributor to the overall behavior of MB entities within the system. Hence, the analysis primarily focuses on this aspect.
b. General adhesion formula
The proposed adhesion framework suggests that distinct amounts of MB entities can attach to specific available spots (interstitial sites) on the area of the NaSS-DMA hydrogel within a defined area. In this molecular scenario, each solute molecule (W) binds to a specific location (L). This interaction can be described mathematically using an equilibrium equation :
$$\:nW+L\rightleftarrows\:{W}_{n}L$$
1
This equilibrium expression illustrates the dynamic exchange between the attached state and the dissolved solute species in the bulk phase.
Take into account that Eq. (1) integrates a stoichiometric metric, n, which quantifies the mean occupancy of adsorbate entities per adsorption location.
Table 1
outlines the major possible n values, its physical interpretation and the main contributing reasons [40, 41].
| Mathematical condition |
n < 1 |
n > 1 |
| Physical interpretation |
This situation indicates a dispersed adsorption pattern where each adsorbate particle interacts with multiple receptor sites. |
This situation suggests that multiple adsorbate species are occupying a single receptor site. It often depicts the formation of adsorbate clusters or multilayers within the receptor cavities. |
| Probable reasons |
• An heterogeneous area with a wide range of adsorption site energies can lead to a dispersed adsorption pattern. • The adsorbate molecules are small and mobile: small, mobile adsorbate entities may readily diffuse across the adsorbent surface interacting with multiple sites. • The adsorbate-adsorbent interactions are weak: weak interactions between adsorbate molecules and the adsorbent surface can promote a dispersed adsorption pattern. |
• Strong intermolecular forces : if the adsorbate entities exhibit strong attractive forces they may cluster together on the adsorbent area. • The geometry of the adsorbate entities and the receptor sites may promote the formation of multilayers. • With high adsorbate concentrations, the probability of multiple entities occupying a single site increases. |
Table 1 : Mathematical condition on n, physical interpretation and probable reasons.
It’s worth mentioning that in the case of dispersed adsorption (n < 1), the reciprocal of 1/n, symbolizes the average number of receptor sites occupied by a single adsorbate entity. A high value of 1/n indicates that each adsorbate molecule is interacting with multiple receptor sites suggesting a dispersed adsorption pattern. Conversely, a low value of 1/n indicates a more localized adsorption where each adsorbate molecule occupies a smaller number of receptor sites.
Assuming independent and energetically equivalent binding positions, the grand canonical partition function for a system with N potential docking cavities per unit area can be outlined as follows [42]:
$$\:{Z}_{gc}={\left(\sum\:_{{N}_{i}}{e}^{-\beta\:\left({\epsilon\:}_{i}-\mu\:\right){N}_{i}}\right)}^{{N}_{M}}$$
2
The parenthetical term represents the grand canonical partition function for a single adsorption site, encapsulating all possible microscopic configurations at that specific location while \(\:{\epsilon\:}_{i}\) portrays the adhesion energy of the interstitial site. The symbol µ characterizes the pore’s chemical potential, Ni determines the binding state and β is defined as 1/(kBT) where kB is the Boltzmann constant and T is the absolute temperature.
The average pore occupancy, N₀, was determined following the procedures described in [43] :
$$\:{N}_{0}={k}_{B}T\frac{\partial\:\:\text{l}\text{n}\left(\sum\:_{{N}_{i}}{e}^{-\beta\:\left({\epsilon\:}_{i}-\mu\:\right){N}_{i}}\right)}{\partial\:\mu\:}$$
3
At thermodynamic equilibrium, the chemical potentials reach a balanced state, expressed by the equation µ = m/n. Particularly, m is the chemical potential of the stacked molecule while n represent the molecular portion per site. The chemical potentiel \(\:{\mu\:}_{m}\) assigned to the dissolved species is expressed [42, 44] :
$$\:{\mu\:}_{m}=\frac{1}{\beta\:}\text{ln}\left(\frac{N}{V{\left(\frac{2\pi\:m{k}_{B}\:T}{{h}^{2}}\right)}^{\raisebox{1ex}{$3$}\!\left/\:\!\raisebox{-1ex}{$2$}\right.}}\right)$$
4
In this context, V represents the volume populated by an adsorbate-adsorbent complex and N denotes the total number of adsorbed species.
The analytical expression for the adsorbed quantity Q is derived from the product of the adsorbate occupancy per site, n, and the average site occupation number, N0, for each respective framework :
c. Report on the tested scenarios
In this section, we will delve into the theoretical underpinnings of the suggested adhesion models grounded in the principles of statistical physics. Each scenario will be meticulously described with particular emphasis on its mathematical formulation and the physical significance of its incorporated parameters. By providing a clear and detailed exposition of these frameworks we aim to elucidate the underlying mechanisms governing the molecular retention and facilitate a comprehensive understanding of the system's behavior.
- Monolayer linking scenario with single energy (MLSSE): it postulates a monolayer retention mechanism wherein MB entities form a single layer on the NaSS-DMA hydrogel surface. This idealized scenario provides a valuable starting point for understanding the fundamental principles of adsorption. W shall employ Nm to quantify the maximum number of available binding sites per unit surface area of the adsorbent. This parameter reflects the adsorbent's capacity for adsorbing molecules while n reflects the average number of MB entities occupying a single adsorption site. This parameter provides insights into the arrangement and distribution of adsorbate molecules on the surface. And finally C 1/2 is employed to quantify the half-saturation concentration representing the adsorbate concentration at which half of the available adsorption sites are occupied.
- Bimodal-energy linking monolayer scenario (BELMS) : It suggests a monolayer retention reaction MB species form a single layer but involving two distinct types of binding sites with varying energetic properties. These binding sites have different densities (Nm1 and Nm2) and capacities (n1 and n2) for adsorbate binding. To fully describe this model, two half-saturation constants (C1 and C2) corresponding to the distinct binding sites must be incorporated.
- Triple-energy linking monolayer scenario (TELMS) : It postulates a monolayer linking reaction wherein MB species form one layer NaSS-DMA hydrogel surface but involving three distinct energetic interactions with the substrate. These distinct binding energy states arise from the interplay of molecular geometry, intermolecular forces and electronic properties between the reagents.
- Dual-energy linking scenario with bilayer (DELSL) : This interresting scenario posits a multilayered linking steps wherein adsorbate entities initially form a stable anchored monolayer followed by the creation of a second layer with lower adhesion energy. The occupancy state of each cavity, denoted by Ni, is quantified as follows: zero for vacant sites, one for sites occupied by a single adsorbate entity and 2n for sites hosting two adsorbate species.
Table 2
displays a comprehensive overview of the mathematical expressions describing the grand canonical partition function and the adsorbed quantities for each proposed adsorption model [39–41].
| Model |
Expression of Qe |
Expression of partition function zgr |
| MLSSE |
\(\:{Q}_{e}=\frac{n{N}_{m}}{1+{\left(\frac{{c}_{1/2}}{c}\right)}^{n}}\) |
\(\:{z}_{gr}=1+{e}^{\beta\:\left(\mu\:+\epsilon\:\right)}\) |
| BELMS |
\(\:{Q}_{e}=\frac{{n}_{1}{N}_{{m}_{1}}}{1+{\left(\frac{{c}_{1}}{c}\right)}^{{n}_{1}}}+\frac{{n}_{2}{N}_{{m}_{2}}}{1+{\left(\frac{{c}_{2}}{c}\right)}^{{n}_{1}}}\) |
\(\:{z}_{1gr}=1+{e}^{\beta\:\left(\mu\:+{\epsilon\:}_{1}\right)}\) \(\:{z}_{2gr}=1+{e}^{\beta\:\left(\mu\:+{\epsilon\:}_{2}\right)}\) |
| TELMS |
\(\:{Q}_{e}=n.{N}_{M}\frac{{\left(\frac{c}{{c}_{1/2}}\right)}^{n}+2{\left(\frac{c}{{c}_{1/2}}\right)}^{2n}+3{\left(\frac{c}{{c}_{1/2}}\right)}^{3n}}{1+{\left(\frac{c}{{c}_{1/2}}\right)}^{n}+{\left(\frac{c}{{c}_{1/2}}\right)}^{2n}+{\left(\frac{c}{{c}_{1/2}}\right)}^{3n}}\) |
\(\:{z}_{gr}=1+{e}^{\beta\:\left(\mu\:+\epsilon\:\right)}+{e}^{2\beta\:\left(\mu\:+\epsilon\:\right)}+{e}^{3\beta\:\left(\mu\:+\epsilon\:\right)}\) |
| DELSL |
\(\:{Q}_{e}=n{N}_{m}\frac{{\left(\frac{c}{{c}_{1}}\right)}^{n}+2{\left(\frac{c}{{c}_{2}}\right)}^{2n}}{1+{\left(\frac{c}{{c}_{1}}\right)}^{n}+{\left(\frac{c}{{c}_{2}}\right)}^{2n}}\) |
\(\:{z}_{gr}=1+{e}^{\beta\:\left(\mu\:+{\epsilon\:}_{1}\right)}+{e}^{\beta\:\left(2\mu\:+{\epsilon\:}_{1}+{\epsilon\:}_{2}\right)}\) |
Table 2 : Analytical expressions of Qeand zgrfor each tested model.
The optimal model will subsequently be utilized to extract valuable physicochemical parameters and calculate thermodynamic properties, providing invaluable insights into the fundamental mechanisms governing the docking reaction.